PPDB

PPDB	The Plant Proteome Database

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AT3G13070.1 CBS domain-containing protein / transporter associated domain-containing protein

Lab Annot.

CBS domain-containing protein / transporter associated domain-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

envelope (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55930.1 11 Arabidopsis thaliana 0 657 80 88 1 (1) C
AT1G55930.2 11 Arabidopsis thaliana 0 588 80 88 0 (0) C
AT2G14520.3 11 Arabidopsis thaliana 8E-14 257 28 48 0 (0) S
Os03g39640.1 6 Oryza sativa 0 475 78 88 0 (0) C
Os03g39640.2 7 Oryza sativa 0 475 78 88 0 (0) C
Os03g47120.1 7 Oryza sativa 1E-11 249 27 47 0 (0) S
Zm00001eb049810_P002 agpv5 Zea mays 0 475 78 88 0 (0) C
Zm00001eb049810_P001 agpv5 Zea mays 0 475 78 88 0 (0) C
Zm00001eb049810_P003 agpv5 Zea mays 0 475 78 88 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBS(2) CorC_HlyC(1) DsbD_2(3) DUF21(1)
TargetP:	Chloroplast (Class 3 C0.794; M0.080; S0.003; _0.278)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	4 TMs
Aramemnon:	5 TMs
TAT position:
Length	661 aa (-cTP 590)
Molecular Weight	73.75 kDA(-cTP 65.65)
PI	5.00(-cTP 4.69)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19995728(proplastid (Brassica napus))
20061580(chloroplast envelope (inner+outer))
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data