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The Plant Proteome Database

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AT3G13060.2   evolutionarily conserved C-terminal region 5

Lab Annot. evolutionarily conserved C-terminal region 5
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13060.4 11Arabidopsis thaliana062499990 (0)_
AT3G13060.3 11Arabidopsis thaliana06121001000 (0)_
AT3G13060.6 11Arabidopsis thaliana06121001000 (0)_
Os08g44200.1 7Oryza sativa062350640 (0)_
Os08g12760.1 7Oryza sativa7E-14162543562 (2)C
Os08g12760.3 7Oryza sativa1E-14056744582 (2)_
Zm00001eb039740_P002 agpv5Zea mays4E-17655154650 (0)_
Zm00001eb039740_P003 agpv5Zea mays9E-17655154650 (0)_
GRMZM2G025488_P02 3.21Zea mays4E-16454352640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3942(1) YTH(1)
TargetP: Cytoplasm (Class 4 C0.501; M0.035; S0.096; _0.742)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 634 aa (-cTP 630)
Molecular Weight 69.48 kDA(-cTP )
PI 5.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2289Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help