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AT3G13060.1 evolutionarily conserved C-terminal region 5

Lab Annot.

evolutionarily conserved C-terminal region 5
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G13060.2 11 Arabidopsis thaliana 0 536 97 98 42 (12) _
AT3G13060.4 11 Arabidopsis thaliana 0 526 97 97 0 (0) _
AT3G13060.3 11 Arabidopsis thaliana 0 514 97 98 0 (0) _
Os08g44200.1 7 Oryza sativa 3E-148 549 48 61 0 (0) _
Os08g12760.1 7 Oryza sativa 8E-112 527 43 54 2 (2) C
Os08g12760.3 7 Oryza sativa 2E-111 468 45 57 2 (2) _
Zm00001eb039740_P002 agpv5 Zea mays 6E-142 473 52 64 0 (0) _
Zm00001eb039740_P003 agpv5 Zea mays 7E-142 473 52 64 0 (0) _
GRMZM2G025488_P02 3.21 Zea mays 2E-130 469 50 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	YTH(2)
TargetP:	Cytoplasm (Class 4 C0.501; M0.035; S0.096; _0.742)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	551 aa (-cTP 547)
Molecular Weight	60.56 kDA(-cTP )
PI	5.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2215	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 trap st
2226	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2262	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 wild-type
2289	Detail								[A. thaliana]		Clp C1 TRAP
2299	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2303	Detail								[A. thaliana]		Clp C1 WT
2305	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data