PPDB

The Plant Proteome Database

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AT3G12960.1   seed maturation protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os08g01370.1 7Oryza sativa7E-135448790 (0)_
GRMZM2G122357_P01 3.21Zea mays3E-115450750 (0)_
Zm00001eb260130_P001 agpv5Zea mays3E-115450750 (0)_
v1_GRMZM2G122357_P01 4a53Zea mays3E-115450750 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 2 C0.134; M0.101; S0.118; _0.850)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 86 aa (-cTP 62)
Molecular Weight 9.46 kDA(-cTP )
PI 5.82(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help