PPDB

The Plant Proteome Database

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AT3G12870.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G56120.1 11Arabidopsis thaliana2E-2920637590 (0)_
Os03g56700.1 7Oryza sativa1E-6919557750 (0)_
Os08g38790.1 7Oryza sativa2E-1516738550 (0)S
Os08g38760.1 7Oryza sativa7E-1014533480 (0)_
Zm00001eb213650_P001 agpv5Zea mays2E-6920453730 (0)_
v1_GRMZM2G130625_P01 4a53Zea mays2E-6920453730 (0)_
GRMZM2G130625_P01 3.21Zea mays2E-6920453730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3671(3) NPCC(1)
TargetP: Cytoplasm (Class 1 C0.049; M0.074; S0.001; _0.965)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 206 aa (-cTP 196)
Molecular Weight 23.70 kDA(-cTP )
PI 9.21(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help