PPDB

PPDB	The Plant Proteome Database

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AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein

Lab Annot.

SNF2 domain-containing protein / helicase domain-containing protein
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G12810.2 11 Arabidopsis thaliana 0 2055 99 99 0 (0) C
AT3G57300.3 11 Arabidopsis thaliana 3E-88 353 44 64 0 (0) _
AT3G57300.1 11 Arabidopsis thaliana 4E-88 353 44 64 1 (1) _
Os02g46450.2 7 Oryza sativa 0 1017 52 67 0 (0) _
Os02g46450.1 7 Oryza sativa 0 1017 52 67 0 (0) _
Os03g22900.1 7 Oryza sativa 2E-128 777 35 50 1 (1) M
v1_GRMZM2G428242_P03 4a53 Zea mays 0 1453 59 73 0 (0) _
GRMZM2G428242_P03 3.21 Zea mays 0 1453 59 73 0 (0) _
GRMZM2G428242_P04 3.21 Zea mays 0 1453 59 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) Helicase_C(1) HSA(1) Myb_DNA-bind_6(1) Myb_DNA-binding(1) ResIII(1) SNF2
TargetP:	Chloroplast (Class 4 C0.760; M0.051; S0.062; _0.543)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	2055 aa (-cTP 2041)
Molecular Weight	234.05 kDA(-cTP 232.62)
PI	5.21(-cTP 5.19)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16287169(Cell Wall proteome)
16358359(cell suspension (Gamborg))
18463617(suspension cells-phosphorylated proteins)
19888209(80S polysomal fraction)
20166762(whole leaf)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data