PPDB

 The Plant Proteome Database

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AT3G12760.1   defective in cullin neddylation protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G15860.1 11Arabidopsis thaliana3E-3120732575 (1)M
AT1G15860.2 11Arabidopsis thaliana3E-3120732575 (1)M
AT1G15860.3 11Arabidopsis thaliana2E-2921632545 (1)M
Os06g12690.1 7Oryza sativa3E-136249718315 (15)M
Os06g12690.3 7Oryza sativa2E-133246718315 (15)_
Os06g12690.5 7Oryza sativa1E-6914668826 (6)M
Zm00001eb194650_P003 agpv5Zea mays7E-14124774860 (0)M
GRMZM2G025806_P02 3.21Zea mays7E-14124774863 (3)M
v1_GRMZM2G025806_P02 4a53Zea mays7E-14124774861 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cullin_binding(1) UBA(1) UBA_4(1)
TargetP: Cytoplasm (Class 5 C0.012; M0.569; S0.070; _0.571)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 250 aa (-cTP 231)
Molecular Weight 29.01 kDA(-cTP )
PI 5.00(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help