PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G12710.1   DNA glycosylase superfamily protein

Lab Annot.
Mapman: 28.2 DNA.repair
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G44680.1 11Arabidopsis thaliana3E-10424560750 (0)C
AT1G75090.1 11Arabidopsis thaliana8E-6919251700 (0)C
AT1G80850.1 11Arabidopsis thaliana2E-6718652700 (0)_
Os01g58550.1 7Oryza sativa1E-10427554700 (0)_
Os04g42290.1 7Oryza sativa6E-7022548680 (0)C
Os06g44050.1 7Oryza sativa3E-6819151720 (0)C
v1_GRMZM2G047384_P03 4a53Zea mays7E-10727556720 (0)_
GRMZM2G047384_P02 3.21Zea mays7E-10727556720 (0)_
Zm00001eb150740_P001 agpv5Zea mays7E-10727556720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Adenine_glyco(1) DUF5813(1)
TargetP: Chloroplast (Class 5 C0.501; M0.114; S0.032; _0.433)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 312 aa (-cTP 268)
Molecular Weight 34.92 kDA(-cTP 30.19)
PI 9.65(-cTP 9.55)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help