PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G12700.1   Eukaryotic aspartyl protease family protein

Lab Annot. aspartyl protease (NANA) (plastid location reported in 22987884 is surprising)
Mapman: 29.5.4.1.1* protein.degradation.aspartate protease.AA.A1
Curated Location plastid (Pubmed: 22987884 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12700.2 11Arabidopsis thaliana1E-13719697970 (0)_
AT3G12700.3 11Arabidopsis thaliana2E-13719697970 (0)_
AT3G25700.1 11Arabidopsis thaliana1E-58423324710 (7)S
Os05g48330.1 7Oryza sativa3E-10540144590 (0)S
Os01g48750.1 7Oryza sativa2E-7930546600 (0)M
Os05g51750.1 7Oryza sativa1E-5140931480 (0)S
Zm00001eb156780_P001 agpv5Zea mays7E-10942442570 (0)S
GRMZM2G128333_P01 3.21Zea mays4E-10841145590 (0)M
Zm00001eb343260_P001 agpv5Zea mays4E-10841145590 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Asp(1) TAXi_C(1) TAXi_N(1)
TargetP: Cytoplasm (Class 2 C0.087; M0.223; S0.036; _0.901)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 461 aa (-cTP 443)
Molecular Weight 50.57 kDA(-cTP )
PI 9.31(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help