PPDB

PPDB	The Plant Proteome Database

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AT3G12670.1 CTP synthase family protein

Lab Annot.

CTP synthase protein
Mapman: 23.1.1.10 nucleotide metabolism.synthesis.pyrimidine.CTP synthetase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G30820.1 11 Arabidopsis thaliana 0 598 76 85 0 (0) S
AT4G20320.1 11 Arabidopsis thaliana 0 581 73 85 0 (0) _
AT4G20320.4 11 Arabidopsis thaliana 0 581 73 85 0 (0) _
Os01g43020.1 7 Oryza sativa 0 604 78 87 0 (0) _
Os01g46570.1 7 Oryza sativa 0 569 79 88 0 (0) _
Os05g49770.1 7 Oryza sativa 0 607 75 85 0 (0) _
GRMZM2G153058_P01 3.21 Zea mays 0 607 77 86 1 (1) _
v1_GRMZM2G153058_P01 4a53 Zea mays 0 607 77 86 1 (1) _
Zm00001eb358270_P003 agpv5 Zea mays 0 607 77 86 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CbiA(1) CTP_synth_N(1) GATase(1) Peptidase_C26(1)
TargetP:	Secreted (Class 4 C0.017; M0.255; S0.567; _0.215)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	591 aa (-cTP 549)
Molecular Weight	64.30 kDA(-cTP )
PI	6.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2286	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (M&Skoog))
16502469(cell suspension-Cd-up)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data