PPDB

PPDB	The Plant Proteome Database

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AT3G12640.1 RNA binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA binding (RRM/RBD/RNP motifs) protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G12640.3 11 Arabidopsis thaliana 0 662 96 96 0 (0) _
AT3G12640.2 11 Arabidopsis thaliana 0 662 96 96 0 (0) _
AT3G12640.4 11 Arabidopsis thaliana 0 662 91 91 0 (0) _
Os04g39629.1 7 Oryza sativa 9E-45 204 49 62 0 (0) _
Os08g39440.2 7 Oryza sativa 4E-44 166 54 68 0 (0) _
Os08g39440.1 7 Oryza sativa 3E-39 191 47 59 0 (0) _
GRMZM2G181453_P01 3.21 Zea mays 2E-92 719 35 50 0 (0) _
v1_GRMZM2G181453_P01 4a53 Zea mays 2E-92 719 35 50 13 (13) _
Zm00001eb424740_P002 agpv5 Zea mays 2E-92 719 35 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AROS(1) DUF1617(3) Nup35_RRM(1) Nup35_RRM_2(1) PWI(1) RRM_1(1)
TargetP:	Cytoplasm (Class 2 C0.114; M0.122; S0.092; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	638 aa (-cTP 613)
Molecular Weight	70.10 kDA(-cTP )
PI	9.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2317	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data