PPDB

PPDB	The Plant Proteome Database

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AT3G12550.1 XH/XS domain-containing protein

Lab Annot.

XS, XH and XS zinc finger domain (a putative nucleic acid binding zinc finger) involved in PTGS
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G12550.4 11 Arabidopsis thaliana 0 638 100 100 0 (0) _
AT3G12550.2 11 Arabidopsis thaliana 0 638 100 100 0 (0) _
AT3G12550.5 11 Arabidopsis thaliana 0 638 99 99 0 (0) _
Os01g44230.1 7 Oryza sativa 3E-143 633 39 62 1 (1) _
Os02g19130.1 7 Oryza sativa 7E-124 632 36 57 0 (0) _
Os01g03570.1 7 Oryza sativa 1E-116 521 39 61 0 (0) M
GRMZM2G160032_P01 3.21 Zea mays 8E-140 633 40 59 0 (0) _
GRMZM2G160032_P04 3.21 Zea mays 8E-140 633 40 59 0 (0) _
Zm00001eb159040_P002 agpv5 Zea mays 8E-140 633 40 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CLZ(4) NolV(1) XH(2) XS(2) zf-XS(1)
TargetP:	Cytoplasm (Class 2 C0.043; M0.119; S0.186; _0.842)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	638 aa (-cTP 545)
Molecular Weight	74.23 kDA(-cTP )
PI	7.97(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data