PPDB

 The Plant Proteome Database

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AT3G12400.1   Ubiquitin-conjugating enzyme/RWD-like protein
Lab Annot. Ubiquitin-conjugating enzyme/RWD-like protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12400.2 11Arabidopsis thaliana03931001000 (0)C
AT3G12400.3 11Arabidopsis thaliana03931001000 (0)C
AT5G13860.1 11Arabidopsis thaliana039969790 (0)C
Os02g58640.1 7Oryza sativa2E-12239250660 (0)C
v1_GRMZM2G147579_P02 4a53Zea mays4E-12641647630 (0)C
GRMZM2G147579_P02 3.21Zea mays4E-126416476327 (0)C
Zm00001eb259630_P004 agpv5Zea mays6E-12541647630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: UEV(2) UQ_con(1) Vps23_core(1)
TargetP: Chloroplast (Class 3 C0.683; M0.214; S0.020; _0.083)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 398 aa (-cTP 383)
Molecular Weight 44.72 kDA(-cTP 43.02)
PI 5.86(-cTP 5.86)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help