PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G12250.4 TGACG motif-binding factor 6

Lab Annot.

Mapman: 27.3.35 RNA.regulation of transcription.bZIP transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G12250.1 11 Arabidopsis thaliana 0 355 92 92 0 (0) _
AT3G12250.7 11 Arabidopsis thaliana 0 355 92 92 0 (0) _
AT3G12250.6 11 Arabidopsis thaliana 0 355 92 92 0 (0) _
Os01g59350.1 7 Oryza sativa 3E-173 300 80 91 0 (0) M
Os01g17260.1 7 Oryza sativa 2E-172 306 79 88 0 (0) _
Os01g17260.2 7 Oryza sativa 2E-172 306 79 88 0 (0) _
Zm00001eb369280_P003 agpv5 Zea mays 8E-174 300 79 92 0 (0) _
GRMZM2G125243_P01 3.21 Zea mays 8E-174 300 79 92 1 (0) _
v1_GRMZM2G125243_P01 4a53 Zea mays 8E-174 300 79 92 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	bZIP_1(1) bZIP_2(1) bZIP_Maf(2) CPSF_A(1) DOG1(1) IclR(1) MotA_ExbB(1) Perilipin
TargetP:	Cytoplasm (Class 1 C0.040; M0.165; S0.024; _0.965)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	355 aa (-cTP 275)
Molecular Weight	39.72 kDA(-cTP )
PI	8.92(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data