PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G12180.1   Cornichon family protein
Lab Annot. cornichon protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12390.1 11Arabidopsis thaliana3E-3713542700 (0)S
AT4G12090.1 11Arabidopsis thaliana9E-3113042620 (0)S
AT1G12340.1 11Arabidopsis thaliana3E-3012040690 (0)_
Os12g32180.1 7Oryza sativa7E-4614050720 (0)S
Os06g04500.1 7Oryza sativa6E-3711050772 (2)S
Os06g04500.2 7Oryza sativa8E-308852772 (2)_
GRMZM2G018885_P01 3.21Zea mays5E-4614051710 (0)S
v1_GRMZM2G018885_P01 4a53Zea mays5E-4614051710 (0)S
v1_GRMZM2G124658_P01 4a53Zea mays4E-4112751710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cornichon(1)
TargetP: Secreted (Class 1 C0.003; M0.033; S0.968; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 2 TMs
TAT position:
Length 146 aa (-cTP 131)
Molecular Weight 17.37 kDA(-cTP )
PI 5.51(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 18931141(peroxisomes- high&low purity (cell culture))
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help