PPDB

 The Plant Proteome Database

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AT3G12145.1   Leucine-rich repeat (LRR) family protein
Lab Annot. FLR1 (FLOR1); enzyme inhibitor
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06860.1 11Arabidopsis thaliana1E-114306567121 (19)S
AT5G06870.1 11Arabidopsis thaliana3E-99306517049 (30)S
AT3G12610.1 11Arabidopsis thaliana3E-4734333500 (0)S
Os05g01430.1 7Oryza sativa7E-6731739540 (0)S
Os05g01444.1 7Oryza sativa3E-6434039520 (0)M
Os07g38130.1 7Oryza sativa2E-6330840550 (0)S
GRMZM2G088531_P01 3.21Zea mays1E-7931243590 (0)S
v1_GRMZM2G088531_P01 4a53Zea mays1E-7931243590 (0)S
GRMZM2G025105_P01 3.21Zea mays7E-7130744580 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LRR_1(7) LRR_4(6) LRR_6(8) LRR_8(4) LRRNT_2(1)
TargetP: Secreted (Class 1 C0.096; M0.004; S0.928; _0.037)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 325 aa (-cTP 251)
Molecular Weight 35.81 kDA(-cTP )
PI 8.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2208Detail       leaf [A. thaliana] total leaf tissue Clp P5 strepII
2211Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 12
2217Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help