PPDB

PPDB	The Plant Proteome Database

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AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein

Lab Annot.

KH domain-containing protein / zinc finger (CCCH type) protein
Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G06770.1 11 Arabidopsis thaliana 2E-128 249 74 84 1 (0) _
AT3G12130.2 11 Arabidopsis thaliana 5E-125 176 100 100 0 (0) C
AT5G06770.6 11 Arabidopsis thaliana 2E-115 223 76 84 0 (0) _
Os02g10080.1 7 Oryza sativa 5E-74 302 48 58 12 (12) _
Os06g41384.1 7 Oryza sativa 2E-69 299 45 53 3 (3) C
Os06g41384.2 7 Oryza sativa 2E-69 299 45 53 1 (1) C
Zm00001eb067160_P002 agpv5 Zea mays 6E-71 302 47 54 0 (0) _
v1_GRMZM2G071034_P01 4a53 Zea mays 6E-71 302 47 54 16 (16) _
GRMZM2G071034_P01 3.21 Zea mays 6E-71 302 47 54 4 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATX_III(1) KH_1(1) Lustrin_cystein(2) oligo_HPY(2) Torus(2) zf-CCCH(2) zf-CCCH_2
TargetP:	Cytoplasm (Class 3 C0.072; M0.290; S0.012; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	248 aa (-cTP 223)
Molecular Weight	25.95 kDA(-cTP )
PI	9.51(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data