PPDB

PPDB	The Plant Proteome Database

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AT3G12120.1 fatty acid desaturase 2

Lab Annot.

Mapman: 11.2.4 lipid metabolism.FA desaturation.omega 6 desaturase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G12120.2 11 Arabidopsis thaliana 0 383 100 100 0 (0) _
AT2G29980.1 11 Arabidopsis thaliana 3E-66 347 39 54 0 (0) _
AT5G05580.1 11 Arabidopsis thaliana 3E-65 341 37 54 0 (0) C
Os02g48560.1 7 Oryza sativa 0 394 67 79 29 (29) S
Os02g48560.3 7 Oryza sativa 0 394 67 79 29 (29) _
Os02g48560.2 7 Oryza sativa 0 394 67 79 29 (29) _
GRMZM2G064701_P01 3.21 Zea mays 0 393 65 77 6 (6) M
Zm00001eb188990_P001 agpv5 Zea mays 0 393 65 77 0 (0) _
Zm00001eb188990_P002 agpv5 Zea mays 0 393 65 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3474(1) FA_desaturase(1)
TargetP:	Cytoplasm (Class 3 C0.151; M0.247; S0.024; _0.793)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	6 TMs
TAT position:
Length	383 aa (-cTP 372)
Molecular Weight	44.05 kDA(-cTP )
PI	8.39(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data