PPDB

PPDB	The Plant Proteome Database

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AT3G12070.1 RAB geranylgeranyl transferase beta subunit 2

Lab Annot.

Mapman: 16.1.1 secondary metabolism.isoprenoids.non-mevalonate pathway

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G12210.2 11 Arabidopsis thaliana 0 314 86 93 5 (3) _
AT5G12210.1 11 Arabidopsis thaliana 0 314 87 93 5 (3) _
AT3G12070.3 11 Arabidopsis thaliana 0 317 100 100 0 (0) _
Os08g40140.1 7 Oryza sativa 3E-177 315 76 86 0 (0) _
Os08g40140.2 7 Oryza sativa 4E-160 286 76 87 0 (0) _
Os11g32090.1 7 Oryza sativa 1E-31 147 44 58 0 (0) M
Zm00001eb035310_P001 agpv5 Zea mays 3E-176 320 73 86 0 (0) _
Zm00001eb035310_P004 agpv5 Zea mays 3E-176 320 73 86 0 (0) _
v1_GRMZM2G124557_P02 4a53 Zea mays 3E-176 320 73 86 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prenyltrans(6) SQHop_cyclase_C(4) SQHop_cyclase_N(3)
TargetP:	Cytoplasm (Class 4 C0.049; M0.181; S0.292; _0.628)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	317 aa (-cTP 299)
Molecular Weight	35.19 kDA(-cTP )
PI	5.45(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data