PPDB

The Plant Proteome Database

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AT3G12030.1   transmembrane/coiled-coil protein (Protein of unknown function DUF106%2C transmembrane)

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06660.1 11Arabidopsis thaliana1E-12519695974 (4)S
Os03g51160.2 7Oryza sativa9E-72205607516 (16)_
Os03g51160.1 7Oryza sativa9E-72205607516 (16)_
Zm00001eb215980_P001 agpv5Zea mays4E-8219763790 (0)S
v1_GRMZM2G045690_P02 4a53Zea mays4E-82197637914 (14)S
v1_GRMZM2G045690_P01 4a53Zea mays4E-82197637914 (14)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DivIC(1) EMC3_TMCO1(1)
TargetP: Secreted (Class 2 C0.015; M0.019; S0.851; _0.237)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 196 aa (-cTP 167)
Molecular Weight 21.53 kDA(-cTP )
PI 9.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help