PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G12010.1   C18orf8

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g26140.2 7Oryza sativa071350680 (0)_
Os10g26140.3 7Oryza sativa071350680 (0)_
Os10g26140.1 7Oryza sativa072948670 (0)_
v1_GRMZM2G444692_P01 4a53Zea mays072747680 (0)_
GRMZM2G444692_P01 3.21Zea mays072747680 (0)_
Zm00001eb048600_P002 agpv5Zea mays072747680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(1) Mic1(1)
TargetP: Cytoplasm (Class 5 C0.222; M0.241; S0.054; _0.246)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 682 aa (-cTP 678)
Molecular Weight 76.41 kDA(-cTP )
PI 5.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help