PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G12000.1   S-locus related protein SLR1%2C putative (S1)

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G21380.2 11Arabidopsis thaliana2E-16541859730 (0)S
AT4G21380.1 11Arabidopsis thaliana7E-16341859730 (0)S
AT1G65790.3 11Arabidopsis thaliana9E-14642056670 (0)S
Os03g35600.1 7Oryza sativa1E-9040438570 (0)S
Os07g36544.1 7Oryza sativa3E-8939140570 (0)S
Os07g36544.2 7Oryza sativa2E-8839140570 (0)S
v1_GRMZM2G465999_P01 4a53Zea mays3E-8940341600 (0)S
GRMZM2G465999_P01 3.21Zea mays3E-8940341600 (0)S
Zm00001eb323640_P001 agpv5Zea mays1E-8840341600 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: B_lectin(1) PAN_2(2) S_locus_glycop(2)
TargetP: Secreted (Class 2 C0.003; M0.193; S0.941; _0.030)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 439 aa (-cTP 374)
Molecular Weight 50.22 kDA(-cTP )
PI 8.98(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help