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AT3G11945.1 homogentisate prenyltransferase

Lab Annot.

homogentisate prenyltransferase HST or PDS2 (derived from At3g11950); involved in PQ9 synthesis
Mapman: 16.1.3.2 secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase

Curated Location

envelope (Pubmed: 26432861 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G11945.2 11 Arabidopsis thaliana 0 393 93 95 25 (25) C
AT2G18950.1 11 Arabidopsis thaliana 5E-49 302 38 55 2 (2) C
AT2G18950.2 11 Arabidopsis thaliana 2E-35 224 37 57 0 (0) C
Os07g38850.1 7 Oryza sativa 1E-140 323 64 72 4 (4) C
Os06g43880.1 7 Oryza sativa 3E-46 313 36 53 0 (0) C
Os06g44840.1 7 Oryza sativa 3E-46 319 36 55 0 (0) M
Zm00001eb107520_P002 agpv5 Zea mays 5E-178 325 75 85 0 (0) C
Zm00001eb107520_P001 agpv5 Zea mays 5E-178 325 75 85 0 (0) C
v1_GRMZM2G113476_P02 4a53 Zea mays 5E-178 325 75 85 20 (20) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	UbiA(1)
TargetP:	Chloroplast (Class 2 C0.802; M0.130; S0.002; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:
TAT position:
Length	386 aa (-cTP 317)
Molecular Weight	42.84 kDA(-cTP 34.92)
PI	10.15(-cTP 9.51)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1260	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 1) thylakoid membrane	wild-type
1262	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 2) thylakoid membrane	wild-type
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1450	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data