PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G11840.1   E3 ubiquitin-protein ligase PUB24-like protein

Lab Annot.
Mapman: 27.3.64 RNA.regulation of transcription.PHOR1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G35930.1 11Arabidopsis thaliana2E-8144137540 (0)_
AT3G52450.1 11Arabidopsis thaliana7E-7147035530 (0)_
AT1G66160.1 11Arabidopsis thaliana1E-3142829440 (0)M
Os04g58920.1 7Oryza sativa3E-7642933520 (0)_
Os01g64570.1 7Oryza sativa2E-6445134490 (0)C
Os02g33590.1 7Oryza sativa4E-6248231480 (0)_
GRMZM2G013776_P01 3.21Zea mays8E-6844431500 (0)_
Zm00001eb065620_P001 agpv5Zea mays8E-6844431500 (0)_
v1_GRMZM2G013776_P01 4a53Zea mays8E-6844431500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: U-box(1) zf-NOSIP(1) zf-Nse(1)
TargetP: Cytoplasm (Class 2 C0.144; M0.044; S0.046; _0.916)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 456 aa (-cTP 369)
Molecular Weight 51.29 kDA(-cTP )
PI 6.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help