PPDB

PPDB	The Plant Proteome Database

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AT3G11820.2 syntaxin of plants 121

Lab Annot.

SYP121 (syntaxin 121); SNAP receptor
Mapman: 31.4 cell.vesicle transport

Curated Location

plasma membrane

TAIR curated location: plasma membrane14586469,11115874,11591731

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G11820.1 11 Arabidopsis thaliana 0 315 100 100 24 (18) _
AT3G52400.1 11 Arabidopsis thaliana 8E-131 270 72 82 0 (0) _
AT1G61290.1 11 Arabidopsis thaliana 4E-129 265 66 84 1 (1) _
Os06g39050.1 7 Oryza sativa 2E-123 271 64 81 0 (0) _
Os03g57310.1 7 Oryza sativa 7E-114 248 67 82 1 (1) _
Os02g11890.1 7 Oryza sativa 3E-111 251 62 81 0 (0) _
v1_GRMZM2G416733_P01 4a53 Zea mays 1E-123 271 63 81 1 (0) _
GRMZM2G095441_P01 3.21 Zea mays 3E-122 265 64 82 2 (2) _
v1_GRMZM2G095441_P01 4a53 Zea mays 3E-122 265 64 82 2 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CD225(1) CK2S(3) DASH_Dam1(2) Desmo_N(1) DUF1664(2) DUF5790(2) Enkurin(2) FeoB_a
TargetP:	Cytoplasm (Class 2 C0.038; M0.189; S0.023; _0.935)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	315 aa (-cTP 310)
Molecular Weight	34.66 kDA(-cTP )
PI	9.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1113	Detail								[A. thaliana]	control for RARE-1 co-IP	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1552	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
17660356(tonoplast (Brassica oleracea buds))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21826108(SYP trans-Golgi-filtered)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data