PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G11730.1   Ras-related small GTP-binding family protein
Lab Annot. Ras-related GTP-binding protein, putative, similar to Rab1-like
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47200.1 11Arabidopsis thaliana2E-1122037486213 (162)S
AT1G02130.1 11Arabidopsis thaliana2E-111203728744 (35)S
AT4G17530.1 11Arabidopsis thaliana5E-1112037485207 (159)S
Os01g37800.1 7Oryza sativa2E-115203768840 (40)S
Os05g01490.1 7Oryza sativa8E-11319977870 (0)S
Os02g43690.1 6Oryza sativa8E-112203738619 (19)S
GRMZM2G106960_P01 3.21Zea mays3E-116203768976 (73)S
Zm00001eb356710_P001 agpv5Zea mays3E-11620376890 (0)S
v1_GRMZM2G106960_P01 4a53Zea mays3E-116203768967 (67)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(2) Arf(1) FeoB_N(1) GTP_EFTU(1) Gtr1_RagA(1) LANC_like(1) MMR_HSR1(1) Ras(1)
TargetP: Secreted (Class 2 C0.037; M0.026; S0.927; _0.313)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 205 aa (-cTP 190)
Molecular Weight 22.72 kDA(-cTP )
PI 5.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(UNKNOWN-LOPIT-callus)
17644812(plasma membrane - suspension cells)
19525416(leaf (wt and clpr4-1 mutant))
21826108(SYP trans-Golgi-filtered)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help