PPDB

PPDB	The Plant Proteome Database

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AT3G11700.1 FASCICLIN-like arabinogalactan protein 18 precursor

Lab Annot.

FASCICLIN-like arabinogalactan protein 18 precursor
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G06390.1 11 Arabidopsis thaliana 0 466 82 88 10 (6) S
AT2G35860.1 11 Arabidopsis thaliana 0 417 79 87 3 (0) S
AT3G52370.2 11 Arabidopsis thaliana 0 420 79 86 0 (0) _
Os03g57460.1 7 Oryza sativa 0 438 69 78 6 (6) S
Os07g06680.1 7 Oryza sativa 0 439 66 76 4 (4) S
Os03g57490.1 7 Oryza sativa 0 432 63 75 0 (0) S
Zm00001eb060130_P001 agpv5 Zea mays 0 443 67 78 0 (0) S
v1_GRMZM2G329181_P03 4a53 Zea mays 0 443 67 78 4 (4) S
GRMZM2G329181_P03 3.21 Zea mays 0 443 67 78 10 (10) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Fasciclin(2)
TargetP:	Secreted (Class 1 C0.006; M0.010; S0.974; _0.071)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	462 aa (-cTP 440)
Molecular Weight	50.79 kDA(-cTP )
PI	6.72(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2192	Detail								[A. thaliana]	total soluble	P3-trap-strepII 16

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)

Comparative Proteomics Data