PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G11650.1   NDR1/HIN1-like 2
Lab Annot. NDR1/HIN1-like 2
Mapman: 35.1 not assigned.no ontology
Curated Location
TAIR curated location: chloroplast14666423
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06320.1 11Arabidopsis thaliana2E-98233667660 (54)_
AT2G35460.1 11Arabidopsis thaliana3E-9723557740 (0)_
AT2G35980.1 11Arabidopsis thaliana6E-7124147630 (0)_
Os04g58850.1 7Oryza sativa7E-37198365428 (28)S
Os01g64450.1 7Oryza sativa1E-1917332470 (0)_
Os01g64480.1 7Oryza sativa2E-1712933530 (0)_
Zm00001eb434140_P001 agpv5Zea mays1E-4019936580 (0)S
GRMZM2G106792_P01 3.21Zea mays1E-39217345511 (7)C
v1_GRMZM2G106792_P01 4a53Zea mays1E-3921734556 (6)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF2749(1) LEA_2(1)
TargetP: Cytoplasm (Class 4 C0.069; M0.293; S0.020; _0.617)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 240 aa (-cTP 219)
Molecular Weight 26.76 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21533090(plasmodesmata-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help