PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G11600.1 E3 ubiquitin-protein ligase

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G06270.1 11 Arabidopsis thaliana 2E-29 106 66 74 1 (1) C
AT5G06270.2 11 Arabidopsis thaliana 2E-29 106 66 74 0 (0) C
AT5G22270.1 11 Arabidopsis thaliana 3E-11 46 54 76 0 (0) C
Os04g33860.1 7 Oryza sativa 2E-16 99 41 59 0 (0) C
Os05g37030.1 7 Oryza sativa 4E-16 54 61 68 0 (0) C
Os04g58790.1 7 Oryza sativa 2E-15 55 60 74 0 (0) _
Zm00001eb083650_P002 agpv5 Zea mays 8E-17 97 45 58 0 (0) M
Zm00001eb083650_P001 agpv5 Zea mays 8E-17 97 45 58 0 (0) M
GRMZM2G047065_P01 3.21 Zea mays 2E-16 96 45 58 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	zf-ribbon_3(1) zinc_ribbon_9(2) Zn_Tnp_IS1(2)
TargetP:	Mitochondria (Class 5 C0.713; M0.717; S0.008; _0.010)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	117 aa (-cTP 71)
Molecular Weight	13.04 kDA(-cTP )
PI	9.33(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(seedling)

Comparative Proteomics Data