PPDB

PPDB	The Plant Proteome Database

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AT3G11110.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G27940.1 11 Arabidopsis thaliana 4E-18 70 50 67 0 (0) _
AT3G10910.1 11 Arabidopsis thaliana 2E-17 159 32 51 0 (0) _
AT1G23980.1 11 Arabidopsis thaliana 3E-16 139 33 51 0 (0) C
Os01g61470.1 7 Oryza sativa 3E-23 159 36 50 0 (0) _
Os05g39260.1 7 Oryza sativa 1E-18 166 31 45 0 (0) _
Os01g11460.1 7 Oryza sativa 4E-17 136 32 47 0 (0) M
GRMZM2G075782_P01 3.21 Zea mays 1E-26 155 40 51 0 (0) _
Zm00001eb290050_P001 agpv5 Zea mays 1E-26 155 40 51 0 (0) _
v1_GRMZM2G075782_P01 4a53 Zea mays 1E-26 155 40 51 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_1(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-rbx1(1)
TargetP:	Cytoplasm (Class 1 C0.052; M0.064; S0.022; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	158 aa (-cTP 147)
Molecular Weight	18.09 kDA(-cTP )
PI	6.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data