PPDB

PPDB	The Plant Proteome Database

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AT3G11100.1 sequence-specific DNA binding transcription factor

Lab Annot.

sequence-specific DNA binding transcription factors
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G05550.1 11 Arabidopsis thaliana 5E-109 250 72 82 0 (0) _
AT5G05550.3 11 Arabidopsis thaliana 8E-109 249 72 82 0 (0) _
AT5G05550.2 11 Arabidopsis thaliana 2E-106 246 71 82 0 (0) _
Os02g35690.2 7 Oryza sativa 5E-38 263 37 54 0 (0) C
Os04g36790.1 7 Oryza sativa 4E-35 95 64 76 0 (0) _
Os05g48690.2 7 Oryza sativa 3E-31 101 59 70 0 (0) C
GRMZM2G392168_P01 3.21 Zea mays 2E-49 244 39 54 0 (0) _
Zm00001eb423330_P001 agpv5 Zea mays 2E-49 244 39 54 0 (0) _
v1_GRMZM2G392168_P01 4a53 Zea mays 2E-49 244 39 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CENP-B_dimeris(1) DUF3246(1) DUF573(1) MADF_DNA_bdg(2) Myb_DNA-bind_3(1) Myb_DNA
TargetP:	Cytoplasm (Class 2 C0.100; M0.225; S0.057; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	249 aa (-cTP 222)
Molecular Weight	28.39 kDA(-cTP )
PI	5.38(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)
21173025(root proteome)

Comparative Proteomics Data