PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G11050.1   ferritin 2

Lab Annot. Ferritin-2
Mapman: 15.2 metal handling.binding, chelation and storage
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40300.1 11Arabidopsis thaliana4E-1172247384198 (142)C
AT5G01600.1 11Arabidopsis thaliana2E-1092027384292 (216)C
AT3G56090.1 11Arabidopsis thaliana3E-1081947787127 (94)C
Os12g01530.2 7Oryza sativa4E-10422866783 (3)S
Os12g01530.1 7Oryza sativa4E-10123664753 (3)S
Os11g01530.1 7Oryza sativa4E-5813464792 (2)S
v1_GRMZM2G325575_P01 4a53Zea mays4E-108200738484 (83)C
GRMZM2G325575_P01 3.21Zea mays4E-1082007384101 (93)C
Zm00001eb195010_P001 agpv5Zea mays4E-10819973840 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ferritin(1) Rubrerythrin(1)
TargetP: Chloroplast (Class 2 C0.915; M0.204; S0.022; _0.020)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 253 aa (-cTP 209)
Molecular Weight 28.38 kDA(-cTP 23.83)
PI 5.53(-cTP 5.13)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
119Detail       root [B. rapa] plastid stroma 
2249Detail       seedlings [A. thaliana] total tissue gfs9
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
19546170(mature pollen grains)
19995723(chloroplast reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help