PPDB

 The Plant Proteome Database

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AT3G10970.3   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Lab Annot. PYRP2-related Haloacid dehalogenase (HAD) hydrolase
Mapman: 35.1 not assigned.no ontology
Curated Location plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G10970.1 11Arabidopsis thaliana0365999998 (6)C
AT3G10970.2 11Arabidopsis thaliana0365999939 (2)C
AT4G11570.1 11Arabidopsis thaliana6E-232142951243 (23)_
Os05g07632.1 7Oryza sativa2E-16433868810 (0)C
Os09g39560.1 7Oryza sativa1E-2221732510 (0)C
Os04g47020.3 7Oryza sativa9E-1622126460 (0)C
GRMZM2G064001_P02 3.21Zea mays4E-16033567800 (0)C
Zm00001eb282030_P001 agpv5Zea mays4E-16033567800 (0)C
v1_GRMZM2G064001_P02 4a53Zea mays4E-16033567800 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HAD_2(1) Hydrolase(1)
TargetP: Chloroplast (Class 1 C0.926; M0.046; S0.028; _0.114)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 364 aa (-cTP 315)
Molecular Weight 41.47 kDA(-cTP 35.91)
PI 6.63(-cTP 5.70)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help