PPDB

The Plant Proteome Database

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AT3G10970.1   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Lab Annot. PYRP2-related Haloacid dehalogenase (HAD) hydrolase
Mapman: 35.1 not assigned.no ontology
Curated Location plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G10970.2 11Arabidopsis thaliana03659910037 (4)C
AT3G10970.3 11Arabidopsis thaliana0365999986 (7)C
AT4G11570.1 11Arabidopsis thaliana2E-232142952212 (31)_
Os05g07632.1 7Oryza sativa1E-16633768810 (0)C
Os09g39560.1 7Oryza sativa2E-2321732520 (0)C
Os04g47020.3 7Oryza sativa2E-1622127460 (0)C
GRMZM2G064001_P02 3.21Zea mays2E-16233567800 (0)C
Zm00001eb282030_P001 agpv5Zea mays2E-16233567800 (0)C
v1_GRMZM2G064001_P02 4a53Zea mays2E-16233567800 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HAD_2(1) Hydrolase(1)
TargetP: Chloroplast (Class 1 C0.926; M0.046; S0.028; _0.114)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 365 aa (-cTP 316)
Molecular Weight 41.57 kDA(-cTP 36.01)
PI 6.63(-cTP 5.70)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help