PPDB

 The Plant Proteome Database

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AT3G10950.1   Zinc-binding ribosomal protein family protein
Lab Annot. 60S ribosomal protein L37a (RPL37aB)
Mapman: 29.2.1.2.2.537 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G60245.1 11Arabidopsis thaliana1E-5591919333 (29)_
Os05g48320.1 7Oryza sativa2E-5892939737 (37)_
Os01g48770.2 7Oryza sativa3E-438384870 (0)_
Os05g48320.2 7Oryza sativa3E-244987910 (0)_
v1_GRMZM2G088880_P02 4a53Zea mays2E-58929397103 (101)_
GRMZM2G303374_P03 3.21Zea mays2E-5892939797 (93)_
GRMZM2G303374_P01 3.21Zea mays2E-5892939797 (93)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: A2L_zn_ribbon(2) Ribosomal_L37ae(1) zf-RING_13(1) zf-U1(1) Zn_Tnp_IS1595(1)
TargetP: Mitochondria (Class 4 C0.039; M0.719; S0.044; _0.466)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 92 aa (-cTP 65)
Molecular Weight 10.45 kDA(-cTP )
PI 10.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1539Detail       leaf [A. thaliana] wild-type
1756Detail       leaf [A. thaliana] total leaf tissue Col_0
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2237Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2240Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 17934214(cytosolic ribosome)
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help