PPDB

 The Plant Proteome Database

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AT3G10850.1   Metallo-hydrolase/oxidoreductase superfamily protein
Lab Annot. hydroxyacylglutathione hydrolase, cytoplasmic / glyoxalase II (GLX2-2)
Mapman: 13.2.3.2 amino acid metabolism.degradation.aspartate family.threonine
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G06130.2 11Arabidopsis thaliana1E-64264415991 (72)C
AT1G06130.1 11Arabidopsis thaliana1E-64264415991 (72)C
AT2G31350.1 11Arabidopsis thaliana3E-6326241593 (0)C
Os03g21460.1 7Oryza sativa3E-145257738415 (15)_
Os09g34100.1 7Oryza sativa8E-6426141576 (6)C
Os01g47690.2 7Oryza sativa9E-18187315215 (15)C
GRMZM2G031825_P01 3.21Zea mays3E-138258708119 (19)_
GRMZM2G031825_P02 3.21Zea mays3E-138258708119 (19)_
v1_GRMZM2G031825_P01 4a53Zea mays3E-138258708116 (16)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HAGH_C(1) Lactamase_B(1) Lactamase_B_2(1) Lactamase_B_3(2) tRNA_NucTransf2(3)
TargetP: Secreted (Class 5 C0.072; M0.098; S0.496; _0.493)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 249)
Molecular Weight 28.79 kDA(-cTP )
PI 5.93(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2249Detail       seedlings [A. thaliana] total tissue gfs9
2316Detail       leaf [A. thaliana] PG plastoglobule 
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 17828791(total leaf)
18814325(cotyledons)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help