PPDB

The Plant Proteome Database

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AT3G10820.1   Transcription elongation factor (TFIIS) family protein

Lab Annot. Transcription elongation factor (TFIIS) protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G10820.2 11Arabidopsis thaliana03941001000 (0)M
AT5G05140.1 11Arabidopsis thaliana3E-158439576710 (10)M
AT5G09850.2 11Arabidopsis thaliana3E-2240526440 (0)_
Os05g34210.1 7Oryza sativa3E-4135234500 (0)_
Os01g17990.1 7Oryza sativa5E-2739126450 (0)_
Os07g44820.1 7Oryza sativa1E-2344828450 (0)_
GRMZM2G087451_P01 3.21Zea mays5E-4235736500 (0)_
Zm00001eb349390_P002 agpv5Zea mays5E-4235736500 (0)_
v1_GRMZM2G087451_P01 4a53Zea mays5E-4235736500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF228(1) Gp-FAR-1(2) Med26(1)
TargetP: Mitochondria (Class 4 C0.028; M0.678; S0.028; _0.457)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 394 aa (-cTP 385)
Molecular Weight 44.31 kDA(-cTP )
PI 6.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help