PPDB

The Plant Proteome Database

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AT3G10710.1   root hair specific 12

Lab Annot. root hair specific 12
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G04960.1 11Arabidopsis thaliana057468791 (1)_
AT1G53840.1 11Arabidopsis thaliana1E-14957741623 (3)_
AT3G14300.1 11Arabidopsis thaliana4E-13254543590 (0)_
Os04g38560.1 7Oryza sativa2E-13851942600 (0)S
Os01g13320.1 7Oryza sativa5E-12655241550 (0)_
Os07g47830.1 7Oryza sativa5E-12351840560 (0)S
GRMZM2G125356_P01 3.21Zea mays4E-14251545608 (8)S
Zm00001eb424030_P001 agpv5Zea mays4E-14251545600 (0)S
v1_GRMZM2G125356_P01 4a53Zea mays4E-14251545607 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectinesterase(1) PMEI(1)
TargetP: Cytoplasm (Class 3 C0.065; M0.412; S0.014; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 561 aa (-cTP 513)
Molecular Weight 62.10 kDA(-cTP )
PI 9.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help