PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G10680.1   HSP20-like chaperones superfamily protein

Lab Annot. small heat shock protein sHSP20-like
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G04890.1 11Arabidopsis thaliana2E-118429610 (0)_
AT5G20970.1 11Arabidopsis thaliana1E-068630510 (0)_
Os03g45340.1 7Oryza sativa6E-068825534 (4)_
GRMZM2G099626_P01 3.21Zea mays7E-0710427500 (0)_
Zm00001eb297350_P001 agpv5Zea mays7E-0710427500 (0)_
v1_GRMZM2G099626_P01 4a53Zea mays7E-0710427500 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) HSP20(2) Pneumo_att_G(1)
TargetP: Chloroplast (Class 5 C0.632; M0.497; S0.014; _0.088)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 490 aa (-cTP 471)
Molecular Weight 54.20 kDA(-cTP 52.16)
PI 8.95(-cTP 8.47)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20061580(chloroplast envelope (inner+outer))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help