PPDB

PPDB	The Plant Proteome Database

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AT3G10650.1 nuclear pore complex protein

Lab Annot.

Nucleoporin Nup136
Mapman: 29.3.1 protein.targeting.nucleus

Curated Location

nucleus (Pubmed: 21189294 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G10650.2 11 Arabidopsis thaliana 0 1309 100 100 0 (0) _
AT5G20200.1 11 Arabidopsis thaliana 8E-21 471 26 43 0 (0) C
Os12g27090.1 7 Oryza sativa 4E-12 686 28 40 0 (0) C
Os03g57430.1 7 Oryza sativa 3E-08 170 42 52 8 (8) _
GRMZM2G329300_P01 3.21 Zea mays 5E-34 653 29 42 9 (9) M
v1_GRMZM2G329300_P01 4a53 Zea mays 5E-34 653 29 42 27 (27) M
Zm00001eb060090_P001 agpv5 Zea mays 2E-33 639 29 42 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:
TargetP:	Cytoplasm (Class 5 C0.420; M0.172; S0.039; _0.461)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1309 aa (-cTP 1265)
Molecular Weight	135.93 kDA(-cTP )
PI	9.46(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data