PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G10620.1   nudix hydrolase homolog 26

Lab Annot. diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase (AtNUDX26)
Mapman: 30.4.3 signalling.phosphinositides.bis(5-nucleosyl)-tetraphosphatase
Curated Location plastid (Pubmed: 23198870 18815383 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06340.1 11Arabidopsis thaliana9E-7619657720 (0)C
AT1G30110.1 11Arabidopsis thaliana3E-6416355740 (0)_
AT1G30110.2 11Arabidopsis thaliana3E-6416355740 (0)_
Os04g58900.1 7Oryza sativa1E-81182637722 (22)C
GRMZM2G406074_P01 3.21Zea mays4E-88211607417 (17)M
Zm00001eb434200_P001 agpv5Zea mays1E-8721160740 (0)_
Zm00001eb434200_P002 agpv5Zea mays1E-8721160740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NUDIX(1)
TargetP: Chloroplast (Class 3 C0.884; M0.428; S0.000; _0.025)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 216 aa (-cTP 163)
Molecular Weight 24.62 kDA(-cTP 18.56)
PI 8.30(-cTP 5.06)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help