PPDB

The Plant Proteome Database

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AT3G10530.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. Transducin/WD40 repeat-like protein
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G33340.1 11Arabidopsis thaliana5E-10124264858 (31)_
AT2G33340.2 11Arabidopsis thaliana5E-10124264858 (31)_
AT2G33340.3 11Arabidopsis thaliana5E-10124264832 (15)_
Os01g08770.1 7Oryza sativa052861770 (0)_
Os10g35200.1 7Oryza sativa3E-0812027450 (0)_
Os10g32880.1 7Oryza sativa1E-07129244820 (20)_
Zm00001eb272000_P003 agpv5Zea mays051361760 (0)_
GRMZM2G096051_P03 3.21Zea mays051361760 (0)_
GRMZM2G096051_P01 3.21Zea mays051361760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) BING4CT(2) Cytochrom_D1(3) eIF2A(3) WD40(3) WD40_like(3)
TargetP: Cytoplasm (Class 1 C0.093; M0.079; S0.075; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 536 aa (-cTP 511)
Molecular Weight 60.26 kDA(-cTP )
PI 9.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1552Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help