PPDB

PPDB	The Plant Proteome Database

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AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein

Lab Annot.

RNA recognition motif and CCHC-type zinc finger domains containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G64200.1 11 Arabidopsis thaliana 7E-14 90 38 60 3 (3) _
AT5G64200.2 11 Arabidopsis thaliana 7E-14 90 38 60 3 (3) _
AT4G20030.1 11 Arabidopsis thaliana 9E-12 80 37 61 0 (0) C
Os09g37720.1 7 Oryza sativa 2E-85 270 58 68 0 (0) M
Os02g39720.4 7 Oryza sativa 7E-12 109 35 50 7 (7) _
Os02g39720.3 7 Oryza sativa 7E-12 109 35 50 7 (7) _
GRMZM2G053223_P01 3.21 Zea mays 4E-77 260 55 65 0 (0) _
v1_GRMZM2G053223_P01 4a53 Zea mays 4E-77 260 55 65 0 (0) _
Zm00001eb104270_P001 agpv5 Zea mays 8E-76 271 56 67 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4604(2) RRM_1(1) RRM_5(1) RRM_occluded(1) zf-CCHC(1) zf-CCHC_3(1) zf-CCHC_6(2
TargetP:	Cytoplasm (Class 3 C0.292; M0.031; S0.010; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	261 aa (-cTP 176)
Molecular Weight	29.37 kDA(-cTP )
PI	6.64(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20166762(guard cells (Arabidopsis))

Comparative Proteomics Data