PPDB

PPDB	The Plant Proteome Database

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AT3G10340.1 phenylalanine ammonia-lyase 4

Lab Annot.

phenylalanine ammonia-lyase, putative
Mapman: 16.2.1.1 secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G37040.1 11 Arabidopsis thaliana 0 693 81 89 71 (5) _
AT3G53260.1 11 Arabidopsis thaliana 0 698 80 89 37 (1) _
AT5G04230.1 11 Arabidopsis thaliana 0 699 82 88 30 (15) _
Os04g43800.1 7 Oryza sativa 0 714 74 83 0 (0) _
Os02g41650.3 7 Oryza sativa 0 693 75 85 26 (26) _
Os02g41650.1 7 Oryza sativa 0 693 75 85 26 (26) _
v1_GRMZM2G170692_P01 4a53 Zea mays 0 693 76 85 6 (6) _
Zm00001eb247660_P001 agpv5 Zea mays 0 693 76 85 0 (0) _
GRMZM2G170692_P01 3.21 Zea mays 0 693 76 85 5 (4) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Lyase_aromatic(1)
TargetP:	Cytoplasm (Class 2 C0.169; M0.097; S0.115; _0.777)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	707 aa (-cTP 625)
Molecular Weight	76.92 kDA(-cTP )
PI	5.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
19292762(Ubiquitin-affinity seedling (10 d))

Comparative Proteomics Data