PPDB

The Plant Proteome Database

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AT3G10340.1   phenylalanine ammonia-lyase 4

Lab Annot. phenylalanine ammonia-lyase, putative
Mapman: 16.2.1.1 secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G37040.1 11Arabidopsis thaliana0693818913 (6)_
AT3G53260.1 11Arabidopsis thaliana0698808911 (1)_
AT5G04230.1 11Arabidopsis thaliana0699828820 (15)_
Os04g43800.1 7Oryza sativa071474830 (0)_
Os02g41650.3 7Oryza sativa0693758526 (26)_
Os02g41650.1 7Oryza sativa0693758526 (26)_
v1_GRMZM2G170692_P01 4a53Zea mays069376856 (6)_
Zm00001eb247660_P001 agpv5Zea mays069376850 (0)_
GRMZM2G170692_P01 3.21Zea mays069376854 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lyase_aromatic(1)
TargetP: Cytoplasm (Class 2 C0.169; M0.097; S0.115; _0.777)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 707 aa (-cTP 625)
Molecular Weight 76.92 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19888209(leaves)
19292762(Ubiquitin-affinity seedling (10 d))

Comparative Proteomics Data


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