PPDB

The Plant Proteome Database

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AT3G10260.3   Reticulon family protein

Lab Annot. reticulon protein
Mapman: 35.1 not assigned.no ontology
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G10260.2 11Arabidopsis thaliana024710010045 (36)_
AT3G10260.1 11Arabidopsis thaliana024710010045 (36)_
AT3G61560.1 11Arabidopsis thaliana3E-6321243660 (0)_
Os03g56900.1 7Oryza sativa2E-9324453729 (9)_
Os07g04910.1 7Oryza sativa4E-8624949704 (4)_
Os03g56900.2 7Oryza sativa3E-8018758789 (9)S
GRMZM2G152921_P03 3.21Zea mays5E-9024653725 (5)_
v1_GRMZM2G152921_P03 4a53Zea mays5E-9024653726 (6)_
Zm00001eb059560_P001 agpv5Zea mays7E-9024653720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5337(3) Reticulon(1)
TargetP: Mitochondria (Class 5 C0.011; M0.499; S0.342; _0.200)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 3 TMs
TAT position:
Length 267 aa (-cTP 248)
Molecular Weight 30.37 kDA(-cTP )
PI 9.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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