PPDB

The Plant Proteome Database

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AT3G10040.1   sequence-specific DNA binding transcription factor

Lab Annot.
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76870.2 11Arabidopsis thaliana1E-5634736570 (0)_
AT1G76870.3 11Arabidopsis thaliana1E-5634736570 (0)_
AT1G76870.1 11Arabidopsis thaliana1E-5634736570 (0)_
Os11g06410.3 7Oryza sativa2E-6636938550 (0)_
Os11g06410.1 7Oryza sativa1E-6536938550 (0)S
Os11g06410.2 7Oryza sativa1E-6536938550 (0)S
Zm00001eb092040_P001 agpv5Zea mays1E-6834738570 (0)_
Zm00001eb202410_P001 agpv5Zea mays7E-6634638540 (0)_
v1_GRMZM2G126148_P02 4a53Zea mays9E-6634638540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Fungus-induced(2) Myb_DNA-bind_4(1)
TargetP: Chloroplast (Class 5 C0.455; M0.060; S0.147; _0.371)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 431 aa (-cTP 375)
Molecular Weight 48.87 kDA(-cTP 42.47)
PI 8.03(-cTP 8.34)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help