PPDB

The Plant Proteome Database

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AT3G10020.1   plant/protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G10020.2 11Arabidopsis thaliana2E-891281001006 (6)_
Os11g05170.1 7Oryza sativa3E-3212650670 (0)_
Os12g05210.1 7Oryza sativa1E-2813547670 (0)_
GRMZM2G031033_P01 3.21Zea mays9E-2914247650 (0)_
Zm00001eb406490_P001 agpv5Zea mays9E-2914247650 (0)_
v1_GRMZM2G031033_P01 4a53Zea mays9E-2914247650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.290; M0.067; S0.068; _0.813)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 149 aa (-cTP 133)
Molecular Weight 16.74 kDA(-cTP )
PI 5.24(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2049Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2068Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2245Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help