PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G09980.1 ankyrin repeat 30A-like protein (DUF662)

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G36410.2 11 Arabidopsis thaliana 6E-84 149 81 95 0 (0) C
AT3G52920.2 11 Arabidopsis thaliana 9E-84 146 84 95 1 (1) C
AT2G36410.1 11 Arabidopsis thaliana 1E-81 152 79 94 0 (0) C
Os04g33450.2 7 Oryza sativa 2E-62 133 70 88 1 (1) _
Os04g33450.1 7 Oryza sativa 4E-49 110 70 88 1 (1) _
Os02g32650.1 7 Oryza sativa 6E-49 140 62 82 0 (0) _
GRMZM2G147390_P01 3.21 Zea mays 5E-59 148 62 81 0 (0) _
Zm00001eb421850_P002 agpv5 Zea mays 5E-59 148 62 81 0 (0) _
v1_GRMZM2G147390_P01 4a53 Zea mays 5E-59 148 62 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_PEP_C(1) DAGAT(1) DUF16(2) DUF1664(2) DUF1690(3) DUF948(1) Exonuc_VII_L(1
TargetP:	Chloroplast (Class 5 C0.439; M0.151; S0.053; _0.314)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	178 aa (-cTP 127)
Molecular Weight	20.59 kDA(-cTP 15.09)
PI	7.88(-cTP 9.05)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1420	Detail								[A. thaliana]
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
2046	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2050	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2051	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2053	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data