PPDB

 The Plant Proteome Database

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AT3G09900.1   RAB GTPase homolog E1E
Lab Annot. AtRABE1e/AtRab8E (Arabidopsis Rab GTPase homolog E1e); GTP binding
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03520.1 11Arabidopsis thaliana1E-143218949764 (53)_
AT3G53610.1 11Arabidopsis thaliana2E-130205869236 (35)_
AT3G53610.2 11Arabidopsis thaliana2E-130205869236 (35)_
Os07g13530.1 7Oryza sativa1E-128205859338 (38)_
Os05g38630.1 7Oryza sativa2E-126208859138 (38)_
Os05g38630.2 7Oryza sativa2E-126208859138 (38)_
Zm00001eb303910_P001 agpv5Zea mays2E-12920586930 (0)S
Zm00001eb094940_P001 agpv5Zea mays1E-12820585920 (0)_
Zm00001eb094940_P003 agpv5Zea mays1E-12820585920 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(2) AAA_16(2) AAA_22(2) AAA_29(1) AAA_5(1) Arf(1) FeoB_N(1) GTP_EFTU(1) Gtr1_
TargetP: Cytoplasm (Class 5 C0.024; M0.328; S0.475; _0.499)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 218 aa (-cTP 213)
Molecular Weight 24.29 kDA(-cTP )
PI 8.32(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1018Detail        [aphid]  
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1614Detail       Natural Senescence leaf [A. thaliana]  
1617Detail        [A. thaliana] m48
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2245Detail       seedlings [A. thaliana] total tissue wild-type
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type
2308Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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